PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG055140.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 197aa MW: 21633.2 Da PI: 8.7745

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG055140.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++lv ++ +G g+W++ ++ g+ R++k+c++rw +yl TRIDC2AG055140.3 14 RGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	53.6	5e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l TRIDC2AG055140.3 67 RGNFTDEEEQSIIQLHQLLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MGRAPCCEKM GLKRGPWTPE EDKILVAHIH SHGHGNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TDEEEQSIIQ LHQLLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLDPGA 120 QEQLEEASAA KKRKKPAAAA APVLSSPDRS VSSTLTESTS TASAAAEQHG NSGSSASASA 180 SVKEECFTSS EESEEFQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	135	KKRLDPGAQEQLEEASAAKKRKK
2	131	135	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	5e-77	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG055140.3