PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG055140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 370aa MW: 40254.5 Da PI: 8.5017

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG055140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32	2.8e-10	61	92	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 rg+WT+eEd++lv ++ +G g+W++ ++ g TRIDC2AG055140.1 61 RGPWTPEEDKILVAHIHSHGHGNWRALPKQAG 92 89*************************99988 PP
2	Myb_DNA-binding	52.3	1.3e-16	160	205	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l TRIDC2AG055140.1 160 RGNFTDEEEQSIIQLHQLLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 205 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
ASGRLAVLPP ISSLLLSSLL SPKEVKDTAH LHPASSARAN SGGRGAVMGR APCCEKMGLK 60 RGPWTPEEDK ILVAHIHSHG HGNWRALPKQ AGEPLPPSLR PSASQTHLRR LLSPSLARRR 120 AAAPRSVPDL RCPCCFAGLL RCGKSCRLRW INYLRPDIKR GNFTDEEEQS IIQLHQLLGN 180 RWSAIAARLP GRTDNEIKNV WHTHLKKRLD PGAQEQLEEA SAAKKRKKPA AAARKREGKI 240 KMRKLDALTA KAAPVLSSPD RSVSSTLTES TSTASAAAEQ HGNSGSSASA SASVKEECFT 300 SSEESEEFQI DESFWSETLS MPLDDINDVC MEPHDAFGKP ADGDMDYWLK VFMEGGGDDN 360 NDGAVDLPQI

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

ASGRLAVLPP ISSLLLSSLL SPKEVKDTAH LHPASSARAN SGGRGAVMGR APCCEKMGLK  60
RGPWTPEEDK ILVAHIHSHG HGNWRALPKQ AGEPLPPSLR PSASQTHLRR LLSPSLARRR  120
AAAPRSVPDL RCPCCFAGLL RCGKSCRLRW INYLRPDIKR GNFTDEEEQS IIQLHQLLGN  180
RWSAIAARLP GRTDNEIKNV WHTHLKKRLD PGAQEQLEEA SAAKKRKKPA AAARKREGKI  240
KMRKLDALTA KAAPVLSSPD RSVSSTLTES TSTASAAAEQ HGNSGSSASA SASVKEECFT  300
SSEESEEFQI DESFWSETLS MPLDDINDVC MEPHDAFGKP ADGDMDYWLK VFMEGGGDDN  360
NDGAVDLPQI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	228	KKRLDPGAQEQLEEASAAKKRKK
2	224	228	KKRKK
3	227	244	KKPAAAARKREGKIKMRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	1e-66	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG055140.1