PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG053650.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 277aa MW: 29869.4 Da PI: 6.8526 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.5 | 8.6e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l d + ++G +W+t++ + g+ R +k+c++rw +yl TRIDC2AG053650.2 15 KGLWSPEEDQKLRDFIVRYGHSCWSTVPVKAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 51 | 3.4e-16 | 69 | 113 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g ++ eE+e +++ lG++ W++Ia++++ gRt++++k++w++yl TRIDC2AG053650.2 69 GMFSREEEETVMSLHATLGNK-WSLIAQHLP-GRTDNEVKNYWNSYL 113 56999****************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MGCKSCQKPK AQHRKGLWSP EEDQKLRDFI VRYGHSCWST VPVKAGLQRN GKSCRLRWIN 60 YLRPGLKHGM FSREEEETVM SLHATLGNKW SLIAQHLPGR TDNEVKNYWN SYLKKRVEGA 120 RAPAKSAGSD APRSPTPSES GRERCTVNQP SNSGSSGPLE SSSTADESSS LTVPGTAASI 180 RPHAPVLPKV MFADWLDMDM DYGTGLMAPS ALDAAFDGSP AQQGASVSTT ADGRCDAVDS 240 LHGIGDGGIC WEFEADMQGG GAGFCDLLSM SEFLGIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 1e-61 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG053650.2 |