PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG053640.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 283aa    MW: 30650.5 Da    PI: 7.236
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG053640.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.48.9e-151562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEd++l d + ++G  +W+t++ + g+ R +k+c++rw +yl
  TRIDC2AG053640.3 15 KGLWSPEEDQKLRDFIVRYGHSCWSTVPVKAGLQRNGKSCRLRWINYL 62
                      678*******************************************97 PP
2Myb_DNA-binding46.39.9e-1570113348
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        ++  E+e    +++ lG++ W+ Ia++++ gRt++++k++w++yl
  TRIDC2AG053640.3  70 MFSRAEEETVMSLHATLGNK-WSQIAQHLP-GRTDNEVKNYWNSYL 113
                       58899***************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MGCKSCQKPK AQHRKGLWSP EEDQKLRDFI VRYGHSCWST VPVKAGLQRN GKSCRLRWIN  60
YLRPGLKHGM FSRAEEETVM SLHATLGNKW SQIAQHLPGR TDNEVKNYWN SYLKKRVEGA  120
RSPAKSAGSD APRSPTPSDS ARERSTVNQP SISGSSGPLE SSSMADDSSN LTVPGVVASI  180
RPHTPVLPKV MFADWLDMDM DMDYGTGLMA PSALDAAFDG SPAQQGVSHQ GGVQVDGMCG  240
AVDSLHGLGN EGICWEFDAG QIHMQGGAGF CDLLSVSEFL GIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.11e-62MYB family protein