PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG053630.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 277aa    MW: 29689.1 Da    PI: 7.062
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG053630.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.22.5e-151562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEd++l d++ ++G  +W+t++ + g+ R +k+c++rw +yl
  TRIDC2AG053630.3 15 KGLWSPEEDQKLRDYIVRYGHSCWSTVPVKAGLQRNGKSCRLRWINYL 62
                      678*******************************************97 PP
2Myb_DNA-binding50.26.1e-1669113248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       g ++ eE+e    +++ lG++ W+ Ia++++ gRt++++k++w++yl
  TRIDC2AG053630.3  69 GMFSREEEETVMSLHATLGNK-WSQIAQHLP-GRTDNEVKNYWNSYL 113
                       56999****************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MGCKSCQKPK AQHRKGLWSP EEDQKLRDYI VRYGHSCWST VPVKAGLQRN GKSCRLRWIN  60
YLRPGLKHGM FSREEEETVM SLHATLGNKW SQIAQHLPGR TDNEVKNYWN SYLKKRVEGA  120
RAPAKSAGSD APRSPTPSDS GRERSTVNQP SNSGSSGPPE SSSTADDSSS LTGPGAAGSI  180
RPHAPVLPKV MFADWLDMDM DYGAGLMAPS ALDAAFDCSP AQQGASGSTT VDGRCGAVDS  240
LQGLGDGGIC WEFEADMQGG GAGFCDLLSM SEFLGIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.12e-61MYB family protein