PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG049860.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 193aa MW: 20696.1 Da PI: 9.7202

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG049860.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	91.6	8.2e-29	44	131	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt...sessstcpyfdqle 86 W ++e+l Li++rrem+++++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk + ++++ + + s +++y+++++ TRIDC2AG049860.2 44 WVQDETLSLIALRREMDNHFNTSKSNKHLWEAISAKMREQGFDRSPTMCTDKWRNLLKEFKKARSHARSSAgagGNGSAKMAYYKEID 131 *****************************************************************99987433456778899999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MLLSGPQPPT PPLLLPESSG EDGGAHDHDS SSRASAPKKR AETWVQDETL SLIALRREMD 60 NHFNTSKSNK HLWEAISAKM REQGFDRSPT MCTDKWRNLL KEFKKARSHA RSSAGAGGNG 120 SAKMAYYKEI DDLLKRRGKA AASPAGSGGG GGAAKSPTPT SKIESYLQFA DKGFEDANIP 180 FGPVEGTNNV VPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.3	6e-48	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG049860.2