PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG048570.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 581aa MW: 62136 Da PI: 6.2836

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG048570.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.5e-31	294	350	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vk se+prsYY+Ct+++C+vkkkvers+ +++v+ei+Y+g+Hnh+ TRIDC2AG048570.1 294 EDGYSWRKYGQKQVKHSEYPRSYYKCTHPSCQVKKKVERSH-EGHVTEIIYKGTHNHP 350 8**************************************.*************8 PP
2	WRKY	105.1	3.7e-33	522	580	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d k v++tYeg+Hnhe TRIDC2AG048570.1 522 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCSVRKHVERASHDLKSVITTYEGKHNHE 580 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MDGHTHLAVE WKDQSPGADC SMLPSFLTDP FPADPLVEDC DGGNDGSEGA GFERHGLSVA 60 VGSPQEEGKP ATPHFGQRSS SSSSLSERMQ ARAGFSVAKL SMPGSEYSGA QSPYLTIPPG 120 LSPASLLESP VFLSNAMGQS SPTTGKLLML GDTNNNNNTR LEPPSIEDRP GAFSFKPLDL 180 KSSQYTAEGK KGSLPNSQHP SAPSRDVPVK TETNIQTTTR GAIPPGHLNQ AQFNNGQDLM 240 KCSYHDCNNK RNRLAADSTT AGGDNNDGPP VTAADSEAAK GDYPAAVATA APAEDGYSWR 300 KYGQKQVKHS EYPRSYYKCT HPSCQVKKKV ERSHEGHVTE IIYKGTHNHP RPAAQGRRPA 360 GGAQVHPFND AQMDAPADNN NNGYGNAGGS QPNAEARSLW HAGVAVQDWR GDGLEATSSP 420 SVPGELCDSS ASMQVHDGAA RFESPEGGVD VTSAVSDEVD GDDRVAHGSM SQGQGAADTT 480 EGDELESKRR KLESCAIDMS TASRAVREPR VVIQTTSEVD ILDDGYRWRK YGQKVVKGNP 540 NPRSYYKCTH PGCSVRKHVE RASHDLKSVI TTYEGKHNHE V

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MDGHTHLAVE WKDQSPGADC SMLPSFLTDP FPADPLVEDC DGGNDGSEGA GFERHGLSVA  60
VGSPQEEGKP ATPHFGQRSS SSSSLSERMQ ARAGFSVAKL SMPGSEYSGA QSPYLTIPPG  120
LSPASLLESP VFLSNAMGQS SPTTGKLLML GDTNNNNNTR LEPPSIEDRP GAFSFKPLDL  180
KSSQYTAEGK KGSLPNSQHP SAPSRDVPVK TETNIQTTTR GAIPPGHLNQ AQFNNGQDLM  240
KCSYHDCNNK RNRLAADSTT AGGDNNDGPP VTAADSEAAK GDYPAAVATA APAEDGYSWR  300
KYGQKQVKHS EYPRSYYKCT HPSCQVKKKV ERSHEGHVTE IIYKGTHNHP RPAAQGRRPA  360
GGAQVHPFND AQMDAPADNN NNGYGNAGGS QPNAEARSLW HAGVAVQDWR GDGLEATSSP  420
SVPGELCDSS ASMQVHDGAA RFESPEGGVD VTSAVSDEVD GDDRVAHGSM SQGQGAADTT  480
EGDELESKRR KLESCAIDMS TASRAVREPR VVIQTTSEVD ILDDGYRWRK YGQKVVKGNP  540
NPRSYYKCTH PGCSVRKHVE RASHDLKSVI TTYEGKHNHE V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-107	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG048570.1