 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TRIDC2AG047550.6 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
| Family | NAC | ||||||||
| Protein Properties | Length: 312aa MW: 34211.2 Da PI: 11.4025 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 174.7 | 2.8e-54 | 13 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeel+++yL+kkv++ ++ + +++ +d++k+ePwdLp+ ++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdk+++
TRIDC2AG047550.6 13 LPPGFRFHPTDEELITHYLAKKVADARFAA-LAVSVADLNKCEPWDLPSLARMGEKEWYFFCLKDRKYPTGLRTNRATESGYWKATGKDKDIF 104
79*************************999.569999***********8778899************************************** PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +++lvg+kktLvfy+grapkg k+ Wvmheyrl
TRIDC2AG047550.6 105 R-GKALVGMKKTLVFYTGRAPKGDKSGWVMHEYRL 138
*.99*****************************98 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 312 aa Download sequence |
MEHGEQEQHA MDLPPGFRFH PTDEELITHY LAKKVADARF AALAVSVADL NKCEPWDLPS 60 LARMGEKEWY FFCLKDRKYP TGLRTNRATE SGYWKATGKD KDIFRGKALV GMKKTLVFYT 120 GRAPKGDKSG WVMHEYRLNA KLHAASTSLI SGRPVIFAER VGAVQGVQEE PARRRSVVGA 180 GVVSSKEKRR GDDGGDRVLR GRRHPAPSAP GHVRLRRLLR RPGGARDLLL QQRAGGGPVL 240 QPNGDGRLRH GHGPPRPSLI VLPVGKLHAV RGPAAPRREP EPGAAPGEQR VPPRSRRRHG 300 AVRQSAAAAG GV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G61430.1 | 1e-78 | NAC family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | TRIDC2AG047550.6 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|