PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG019880.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 733aa MW: 79914.6 Da PI: 4.7377 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.1 | 2e-13 | 5 | 49 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W+++Ed+ l ++ +G+++W+ Ia + +t+ qc+ rw++yl TRIDC2AG019880.3 5 SWSAQEDDVLRAQIAHHGTDNWTVIATQFK-DKTARQCRRRWYNYL 49 6****************************9.**************7 PP | |||||||
2 | Myb_DNA-binding | 41.2 | 3.9e-13 | 55 | 98 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W+ eEd ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2AG019880.3 55 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 98 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 733 aa Download sequence |
RHIVSWSAQE DDVLRAQIAH HGTDNWTVIA TQFKDKTARQ CRRRWYNYLN TECKKGGWSR 60 EEDMLLCEAQ KLLGNKWTEI AKVVSGRTDN AVKNRFSTLC KRRAKDDELF EENGTVCSNA 120 SAKRVLTQSG GVTCAAPGSS PPIKNMSSCK PDFKENIAPN MKSFAQQKSI QQDSRQPLAS 180 ICPDNQSVNI VKTQSLVTKT STKQLHGEEQ SCVKHEGNFL KRNDPKLATL LQQADLLSSL 240 ATKVNTENTS QSMDEAWQKL QHHLVKKDDN DMSESSMSGT ASLLDDLDDL IVDPYENEEE 300 DEQKSREQNG ATSQMAPDQI MDNCPVDQIA EESSLCGNTL SSTMEPCPVA EILAHINLGE 360 AAEDMGLHFM EYSSPTRAAQ AQQAKADAEI PASVDLSESA EGSWSQFMEY TSPAHTVLHA 420 NSSPAHTVQA EQAKADAEIP VSVDLSEAAE GSWSQFMEYT SPAHTVLHAE GDAETPASVK 480 LREAAEGSLP QCMEHMSPAH TLLRAKRDSE IPASANSNEA AEGSWSQFME YMSPAHIVLH 540 AKADAETPAS VNLGEAAEGS LPQCMEPMSP AHTLLRAKTD YEIPASANLS EAAKYDSLQC 600 TECTSPARAD LQAKADEEIS ENFSEVAQDS RLQCAKFTSL AHTASKGKAV AKKGTSENCS 660 DVPEDSSTQP CMEFTSPAHT VPTFHPFTDN VPTPKITASE RNFLLSVLEL ASPGSKPETS 720 QQPSCKRALL NSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02820.1 | 3e-69 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG019880.3 |