PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG019880.14

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 644aa MW: 69543.3 Da PI: 4.5042

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG019880.14	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.3	1.8e-08	2	35	11	46
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2AG019880.14 2 LLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 35 6899******.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
MLLCEAQKLL GNKWTEIAKV VSGRTDNAVK NRFSTLCKRR AKDDELFEEN GTVCSNASAK 60 RVLTQSGGVT CAAPGSSPPI KNMSSCKPDF KENIAPNMKS FAQQKSIQQD SRQPLASICP 120 DNQSVNIVKT QSLVTKTSTK QLHGEEQSCV KHEGNFLKRN DPKLATLLQQ ADLLSSLATK 180 VNTENTSQSM DEAWQKLQHH LVKKDDNDMS ESSMSGTASL LDDLDDLIVD PYENEEEDEQ 240 KSREQNGATS QMAPDQIMDN CPVDQIAEES SLCGNTLSST MEPCPVAEIL AHINLGEAAE 300 DMGLHFMEYS SPTRAAQAQQ AKADAEIPAS VDLSESAEVQ AEQAKADAEI PVSVDLSEAA 360 EGSWSQFMEY TSPAHTVLHA EGDAETPASV KLREAAEGSL PQCMEHMSPA HTLLRAKRDS 420 EIPASANSNE AAEGSWSQFM EYMSPAHIVL HAKADAETPA SVNLGEAAEG SLPQCMEPMS 480 PAHTLLRAKT DYEIPASANL SEAAKYDSLQ CTECTSPARA DLQAKADEEI SENFSEVAQD 540 SRLQCAKFTS LAHTASKGKA VAKKGTSENC SDVPEDSSTQ PCMEFTSPAH TVPTFHPFTD 600 NVPTPKITAS ERNFLLSVLE LASPGSKPET SQQPSCKRAL LNSL

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

MLLCEAQKLL GNKWTEIAKV VSGRTDNAVK NRFSTLCKRR AKDDELFEEN GTVCSNASAK  60
RVLTQSGGVT CAAPGSSPPI KNMSSCKPDF KENIAPNMKS FAQQKSIQQD SRQPLASICP  120
DNQSVNIVKT QSLVTKTSTK QLHGEEQSCV KHEGNFLKRN DPKLATLLQQ ADLLSSLATK  180
VNTENTSQSM DEAWQKLQHH LVKKDDNDMS ESSMSGTASL LDDLDDLIVD PYENEEEDEQ  240
KSREQNGATS QMAPDQIMDN CPVDQIAEES SLCGNTLSST MEPCPVAEIL AHINLGEAAE  300
DMGLHFMEYS SPTRAAQAQQ AKADAEIPAS VDLSESAEVQ AEQAKADAEI PVSVDLSEAA  360
EGSWSQFMEY TSPAHTVLHA EGDAETPASV KLREAAEGSL PQCMEHMSPA HTLLRAKRDS  420
EIPASANSNE AAEGSWSQFM EYMSPAHIVL HAKADAETPA SVNLGEAAEG SLPQCMEPMS  480
PAHTLLRAKT DYEIPASANL SEAAKYDSLQ CTECTSPARA DLQAKADEEI SENFSEVAQD  540
SRLQCAKFTS LAHTASKGKA VAKKGTSENC SDVPEDSSTQ PCMEFTSPAH TVPTFHPFTD  600
NVPTPKITAS ERNFLLSVLE LASPGSKPET SQQPSCKRAL LNSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	3e-33	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG019880.14