PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG019090.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GeBP

Protein Properties

Length: 357aa MW: 38940.9 Da PI: 5.7801

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG019090.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	110.2	1.4e-34	74	173	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkife 90 lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++ + sg +sf+++h+q ife TRIDC2AG019090.2 74 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVSRlRGSGAAFSFRSPHEQAIFE 166 79**********************99877778***********************************8889************ PP DUF573 91 lskkiWg 97 +++ iW+ TRIDC2AG019090.2 167 IARNIWR 173 ****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MLPAGDGSSA AVAALSFTDA DGDDYSEDGD FTGAPFLEPP DPSLPDPTSS SATALLPAGG 60 SGGQASSGGE RRPLFQRLWT EEDEIVILRG FAEFTAARGT AFASHQYDTD PFYEDMRRRL 120 QLDFSKSQLV EKLRRLKRKY RNCVSRLRGS GAAFSFRSPH EQAIFEIARN IWRPTNKHGR 180 DPSADSDDEE AVVAAAAVAA TPVPANTSPN GEVKSPSGRQ RRRRRSVESA APSAPAAVPA 240 TILVQPPQPV QVQVPVSVPV KMDDSLPALP QAPMPVTDVE KNFLTPMFKE MIHAVINMGS 300 SPFGMKLPEP PHGLPMEGEK WRNQRILELE VYLKRIELLQ DQVKATLEEL KSSTPRT

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MLPAGDGSSA AVAALSFTDA DGDDYSEDGD FTGAPFLEPP DPSLPDPTSS SATALLPAGG  60
SGGQASSGGE RRPLFQRLWT EEDEIVILRG FAEFTAARGT AFASHQYDTD PFYEDMRRRL  120
QLDFSKSQLV EKLRRLKRKY RNCVSRLRGS GAAFSFRSPH EQAIFEIARN IWRPTNKHGR  180
DPSADSDDEE AVVAAAAVAA TPVPANTSPN GEVKSPSGRQ RRRRRSVESA APSAPAAVPA  240
TILVQPPQPV QVQVPVSVPV KMDDSLPALP QAPMPVTDVE KNFLTPMFKE MIHAVINMGS  300
SPFGMKLPEP PHGLPMEGEK WRNQRILELE VYLKRIELLQ DQVKATLEEL KSSTPRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	4e-35	GeBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG019090.2