PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG012470.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 397aa MW: 44800.7 Da PI: 6.0169

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG012470.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40.4	9.8e-13	133	212	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e GF +r ks+ + n++ +++ vC + gk+ e+++ + r++C a +++ ++kd+ w++++ + HnH+l+ TRIDC2AG012470.1 133 DFYNLYSWEKGFGIRYGKSRLN-VNRTKCMQEIVCGCAGKPIVENTR---------SCRCECPALMRLLRSKDNGWYIAEHRDVHNHALT 212 6***************9998.555578899***99887555.........99****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MEFLLQPINR TLLEEVNDNN SAMEPVRFPV AAAAEVEPPA PAASSADAQI CLPETEAADM 60 PQCSEHSIEQ MDPKAPGWTQ RVRVGAAAEG RAPCSDRVTA LEKTVREFAE TPGDIVIVPK 120 IGTSFDSLGE AYDFYNLYSW EKGFGIRYGK SRLNVNRTKC MQEIVCGCAG KPIVENTRSC 180 RCECPALMRL LRSKDNGWYI AEHRDVHNHA LTQTYGQTIH WPSHKHIDVY SRDLVKQLRQ 240 NNVSLAKVYS IIGSFFGRME NVPFTKRALR NLCGKISHEQ SEDDVRKTME VFQELCSKDP 300 QFTYRVQADS EGRISNLMWA TGNSRLQYNF FGDVVTFDTT YRTNLYDMPF GLFVGVNSHF 360 QIIILAGVLV KHETVETFEW VFSEFVRIMG GAANNPD

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MEFLLQPINR TLLEEVNDNN SAMEPVRFPV AAAAEVEPPA PAASSADAQI CLPETEAADM  60
PQCSEHSIEQ MDPKAPGWTQ RVRVGAAAEG RAPCSDRVTA LEKTVREFAE TPGDIVIVPK  120
IGTSFDSLGE AYDFYNLYSW EKGFGIRYGK SRLNVNRTKC MQEIVCGCAG KPIVENTRSC  180
RCECPALMRL LRSKDNGWYI AEHRDVHNHA LTQTYGQTIH WPSHKHIDVY SRDLVKQLRQ  240
NNVSLAKVYS IIGSFFGRME NVPFTKRALR NLCGKISHEQ SEDDVRKTME VFQELCSKDP  300
QFTYRVQADS EGRISNLMWA TGNSRLQYNF FGDVVTFDTT YRTNLYDMPF GLFVGVNSHF  360
QIIILAGVLV KHETVETFEW VFSEFVRIMG GAANNPD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-36	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG012470.1