PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG072200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CPP | ||||||||
Protein Properties | Length: 179aa MW: 18277.8 Da PI: 9.3269 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 22.2 | 2.9e-07 | 31 | 68 | 4 | 39 |
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkC..edCkNk 39 + C+C+ s C C Cf +++ Cs++C+C + C N+ TRIDC1BG072200.1 31 NWCSCRTSGCRIHRCPCFMHNAWCSSKCNCaaTVCVNR 68 67****************************66668886 PP | |||||||
2 | TCR | 27.2 | 7.8e-09 | 110 | 146 | 4 | 40 |
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 kgC+C skC +k C C ++g+ C+ +C+C++C+N + TRIDC1BG072200.1 110 KGCTCVLSKCTNKKCGCLNRGARCTLKCSCQGCENGK 146 89*********************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
AAQPQPKPLP AQEPESKGEA RNNSPSAVKM NWCSCRTSGC RIHRCPCFMH NAWCSSKCNC 60 AATVCVNRSG AKGALAEKLQ HRGIKREVLA SGSVTSTATA GAVLANEGGK GCTCVLSKCT 120 NKKCGCLNRG ARCTLKCSCQ GCENGKGTGG ADKSNAGAGG TGGTSDTRGS GPNKQIRIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04850.1 | 1e-09 | CPP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG072200.1 |