PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG072190.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CPP | ||||||||
Protein Properties | Length: 206aa MW: 20965.5 Da PI: 5.2421 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 23.4 | 1.2e-07 | 91 | 128 | 4 | 40 |
TCR 4 kgCnCkkskClkkYCeCfaagkkCsee.CkCedCkNke 40 +CnC+ +kCl+ C Cf +g C CkC dC+N++ TRIDC1BG072190.4 91 VKCNCSFTKCLNCQCTCFREGLSCIMGrCKCYDCENND 128 68**********************7644********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
STCDCLIRNA LCCSGCNCGG DCQKDLSLGT INPAAAQGTT PTLASGSSAA QDTAQTEPLA 60 PSSSTAQGIT QPQPLAPSSS TAAVPKPEAV VKCNCSFTKC LNCQCTCFRE GLSCIMGRCK 120 CYDCENNDDW LADEDYVECA CKTKNCKTGA CGCNKKLKGC NPNCTCIGCD NGYGMKEADK 180 SNAGPGGTGG TSDAGGSGSN KQIRIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22780.1 | 5e-07 | CPP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG072190.4 |