PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG070900.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 662aa MW: 74707.9 Da PI: 8.8026

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG070900.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4.1e-07	477	516	3	39
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 W +eE ell +a +++++g +W+ I++ +g+gR++ + TRIDC1BG070900.1 477 EWGKEEVELLRKATHKYPKGtnkRWEVISEFIGTGRSADE 516 7***********************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MGSKRTCLLI TYSPEIVDGV PLYVSSNCLP VKASKYEPAG HSFHAVALKL RGLDEKEDTE 60 TDDRSVSSDD KSQDFSAGSD NFSSKGKKKS GSGSQQQDHY ALLGLGNLRF LATEDQIRKS 120 YRDMALKHHP DKQAALLLHE TTEAAKQAKK DEIESHFKAI QEAYEVLMDP TKRRIFDSTD 180 EFDDDIPTDC APQDFFKVFG PAFMRNGRWS VTQPIPSLGD DATPVVDVDQ FYNFWYNFKS 240 WREFPHEDEY DLEQAESREH KRWMERQNAK IQEKAKKVEY TRVRNLVDNA YRKDPRIQRR 300 KEQEKAEKQR RKEAKYMAKK LQEEEAARAA EEERKRKEEE AKIAAAAADI RKKLKEKEKK 360 LLRKEKNRLR ALVGQVVQES HFSLSKEDVE TVCTSHDFEQ LKKLCDIMED KDTAERARLL 420 RGALSKEENS SNTSQEEKIH ANGVADSTPK STVPQGTPKS TAPQVITLGN YEKKEKEWGK 480 EEVELLRKAT HKYPKGTNKR WEVISEFIGT GRSADEILKA TKTILLQKPD SAKAFDSFLE 540 KRKAAPSIVS PLSTRDETAG GSTVGTGTEP SKAAEQPAAS SSQTAKEKTG ADPVLEEAPS 600 ATDPDAWSEA QVLAVVQALK AFPKDANQRW ERVAAAVPGK TVVQCKKKIA SMRSNFRTKK 660 AE

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MGSKRTCLLI TYSPEIVDGV PLYVSSNCLP VKASKYEPAG HSFHAVALKL RGLDEKEDTE  60
TDDRSVSSDD KSQDFSAGSD NFSSKGKKKS GSGSQQQDHY ALLGLGNLRF LATEDQIRKS  120
YRDMALKHHP DKQAALLLHE TTEAAKQAKK DEIESHFKAI QEAYEVLMDP TKRRIFDSTD  180
EFDDDIPTDC APQDFFKVFG PAFMRNGRWS VTQPIPSLGD DATPVVDVDQ FYNFWYNFKS  240
WREFPHEDEY DLEQAESREH KRWMERQNAK IQEKAKKVEY TRVRNLVDNA YRKDPRIQRR  300
KEQEKAEKQR RKEAKYMAKK LQEEEAARAA EEERKRKEEE AKIAAAAADI RKKLKEKEKK  360
LLRKEKNRLR ALVGQVVQES HFSLSKEDVE TVCTSHDFEQ LKKLCDIMED KDTAERARLL  420
RGALSKEENS SNTSQEEKIH ANGVADSTPK STVPQGTPKS TAPQVITLGN YEKKEKEWGK  480
EEVELLRKAT HKYPKGTNKR WEVISEFIGT GRSADEILKA TKTILLQKPD SAKAFDSFLE  540
KRKAAPSIVS PLSTRDETAG GSTVGTGTEP SKAAEQPAAS SSQTAKEKTG ADPVLEEAPS  600
ATDPDAWSEA QVLAVVQALK AFPKDANQRW ERVAAAVPGK TVVQCKKKIA SMRSNFRTKK  660
AE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	334	355	RKRKEEEAKIAAAAADIRKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06110.1	0.0	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG070900.1