PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG068900.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 85aa MW: 9912.44 Da PI: 11.9117 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.2 | 8.9e-19 | 26 | 69 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+v++ +++G++ W++Iar+++ gRt++++k++w++ TRIDC1BG068900.3 26 RGNITPEEHLLIVELQARWGNR-WSKIARHLP-GRTDNEIKNFWRT 69 8999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence |
MYAGLNRTGK SCRLRWLNYL RPDVRRGNIT PEEHLLIVEL QARWGNRWSK IARHLPGRTD 60 NEIKNFWRTK IQKKRSAGAT AATAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 5e-45 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG068900.3 |