PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG068900.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 137aa MW: 15167.2 Da PI: 11.4461 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.4 | 5.8e-17 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ l+d+v+ G g W++ ar g++Rt+k+c++rw++yl TRIDC1BG068900.2 21 KGPWTMEEDLVLADYVAANGEGAWNSLARAAGLNRTGKSCRLRWLNYL 68 79*********************************************7 PP | |||||||
2 | Myb_DNA-binding | 57.7 | 2.7e-18 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+v++ +++G++ W++Iar+++ gRt++++k++w++ TRIDC1BG068900.2 74 RGNITPEEHLLIVELQARWGNR-WSKIARHLP-GRTDNEIKNFWRT 117 8999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
RRRTMQCAAG GGGGGEPAVR KGPWTMEEDL VLADYVAANG EGAWNSLARA AGLNRTGKSC 60 RLRWLNYLRP DVRRGNITPE EHLLIVELQA RWGNRWSKIA RHLPGRTDNE IKNFWRTKIQ 120 KKRSAGATAA TAPGASF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G40350.1 | 4e-65 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG068900.2 |