PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG067240.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 745aa MW: 81438.2 Da PI: 7.3905

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG067240.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.3	8e-25	188	289	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + TRIDC1BG067240.5 188 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RG 277 99**************************963.3445679********************************************..34 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++el+++v+r+ TRIDC1BG067240.5 278 DDGELRLGVRRA 289 89999*9996 PP
2	Auxin_resp	111.6	7.7e-37	314	394	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +aha++tks+F+++YnPr s+seF+v+++k+ k++++++s+G Rfkm++e+ed++err++G+++g+ d+dp W++SkW++L TRIDC1BG067240.5 314 VAHAVATKSMFQIFYNPRLSQSEFIVPYWKFAKSFSQPFSAGLRFKMRYESEDAAERRYTGIITGTGDADP-MWRGSKWKCL 394 79*******************************************************************.9******9 PP

Sequence ? help Back to Top
Protein Sequence Length: 745 aa Download sequence
MAGIDLNTVE EDEEESSAEL LLAGSGAGDC SSQSQSQSQT HSHSHSQSQT QSGHGQGSSS 60 VATPPPPPPP RPSAVCLELW HACAGPVAPM PRKGGVVVYL PQGHLDHLGD APAHAAPSPA 120 AVPPHVFCRV VDVTLHADAS TDEVYAQLSL LPENEEVVRR MREATEDGSG GEDGETVKQR 180 FARMPHMFCK TLTASDTSTH GGFSVPRRAA EDCFPPLDYS QQRPSQELVA KDLHGTEWKF 240 RHIYRGQPRR HLLTTGWSAF VNKKKLVSGD AVLFLRGDDG ELRLGVRRAV QLKNGSAFPA 300 LYSQCSNLGT LANVAHAVAT KSMFQIFYNP RLSQSEFIVP YWKFAKSFSQ PFSAGLRFKM 360 RYESEDAAER RYTGIITGTG DADPMWRGSK WKCLLVRWDD DGEFRRPNRV SPWEIELTSS 420 ASGSHLAAPT SKRMKPYLPH ANPDFTVPHG GGRPDFAESA QLRKVLQGQE LLGYRTHDGT 480 AVATSQPCEA RNLQYIDERG CSNNGSNNVL GGIPSHGVRT PLGIPYHCSG FGESQRFQKV 540 LQGQEVFRPY RGSLVDARMR NGGFQQQDGP YASALLDKWR AQQQHAFGFG PPAPVLPSQP 600 SLSPPSVLMF QLDTDPKVSR FEFGHGHLDK NVDDPYARFV SAEGIGRGEQ MLSLRPHLGS 660 EVIDSRVAVE NKGVAPTNSC KIFGISLAEK VRARDEMGCD DGAANYPSPT QPLKQQVPKS 720 LGNSCATVHE QRPVVGRAID VQQWI

Sequence ? help Back to Top

Protein Sequence Length: 745 aa Download sequence

MAGIDLNTVE EDEEESSAEL LLAGSGAGDC SSQSQSQSQT HSHSHSQSQT QSGHGQGSSS  60
VATPPPPPPP RPSAVCLELW HACAGPVAPM PRKGGVVVYL PQGHLDHLGD APAHAAPSPA  120
AVPPHVFCRV VDVTLHADAS TDEVYAQLSL LPENEEVVRR MREATEDGSG GEDGETVKQR  180
FARMPHMFCK TLTASDTSTH GGFSVPRRAA EDCFPPLDYS QQRPSQELVA KDLHGTEWKF  240
RHIYRGQPRR HLLTTGWSAF VNKKKLVSGD AVLFLRGDDG ELRLGVRRAV QLKNGSAFPA  300
LYSQCSNLGT LANVAHAVAT KSMFQIFYNP RLSQSEFIVP YWKFAKSFSQ PFSAGLRFKM  360
RYESEDAAER RYTGIITGTG DADPMWRGSK WKCLLVRWDD DGEFRRPNRV SPWEIELTSS  420
ASGSHLAAPT SKRMKPYLPH ANPDFTVPHG GGRPDFAESA QLRKVLQGQE LLGYRTHDGT  480
AVATSQPCEA RNLQYIDERG CSNNGSNNVL GGIPSHGVRT PLGIPYHCSG FGESQRFQKV  540
LQGQEVFRPY RGSLVDARMR NGGFQQQDGP YASALLDKWR AQQQHAFGFG PPAPVLPSQP  600
SLSPPSVLMF QLDTDPKVSR FEFGHGHLDK NVDDPYARFV SAEGIGRGEQ MLSLRPHLGS  660
EVIDSRVAVE NKGVAPTNSC KIFGISLAEK VRARDEMGCD DGAANYPSPT QPLKQQVPKS  720
LGNSCATVHE QRPVVGRAID VQQWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-158	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG067240.5