PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1BG067010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | CPP | ||||||||
Protein Properties | Length: 238aa MW: 24495.7 Da PI: 7.7987 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 23.7 | 9.4e-08 | 122 | 159 | 4 | 40 |
TCR 4 kgCnCkkskClkkYCeCfaagkkCsee.CkCedCkNke 40 +CnCk +kC++ C Cf++g C CkC dC+N++ TRIDC1BG067010.1 122 VKCNCKVTKCINCQCICFKEGLSCVMGrCKCYDCENNH 159 68**********************8644********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
LPLPHARRCR DTSSLVSTMS RTTCSCPKCF QGTCDCLIRN ALCCSGCNCG GDCQKDLSLG 60 TINPAAAQGT TPTLASGSSA AQDTAQTQPL APSSSTAQGI TQPQPLAPSS STAAVPKPEA 120 VVKCNCKVTK CINCQCICFK EGLSCVMGRC KCYDCENNHD WLADEDYEDC ACKTKNCKTG 180 HCSCNKKLKG CNPNCTCIGC ENGYGMKGAA DKSNAGPGGT GGTSDAGGSG SNNQIRIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G22780.1 | 2e-06 | CPP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1BG067010.1 |