PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG062320.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 266aa    MW: 28683 Da    PI: 5.6964
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG062320.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.2e-21135184255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp+    r  r++lg+f+tae+Aa+a+++a+ +++g
  TRIDC1BG062320.5 135 KYRGVRQRP-WGKWAAEIRDPR----RaVRVWLGTFDTAEDAARAYDRAAVEFRG 184
                       8********.**********82....48***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MTFSVSAAME GGHGHEYMIR FDGHLEDPSP STATAEPPPP PPPFAGRAIS PEQEHGAMVA  60
ALLHVISGYT TPPPDFFPAA AGKEVCPVCR VDGCLGCEFF GAAEATGATA AALDAPKAAV  120
TAGGPQRRRR NKKNKYRGVR QRPWGKWAAE IRDPRRAVRV WLGTFDTAED AARAYDRAAV  180
EFRGPRAKLN FPFPEQQQLG DGNAAPAKSG TCSPSPSSAE VEVRVPQTWQ QNGGQETGDQ  240
LWDGLQDLMK LDESELWFPP SANSWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-28ERF family protein