PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1BG056660.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | VOZ | ||||||||
Protein Properties | Length: 390aa MW: 43376.1 Da PI: 6.0027 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 406.8 | 4.3e-125 | 70 | 290 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne....glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaataksp 89 p+ps++lgpkcalwdc rp++gse++qdyc+ +ha laln+ g+ gt+pv+rp+gidlkdg+lf+al akvqgk+vgip+c gaat+ksp TRIDC1BG056660.2 70 PSPSQYLGPKCALWDCGRPVRGSEECQDYCNPYHAGLALNDdgllGTMGTRPVMRPRGIDLKDGPLFDALCAKVQGKNVGIPVCVGAATSKSP 162 89**************************************96444567899****************************************** PP VOZ 90 wnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182 wna elfdlsllege++rewlffd+prrafesgnrkqrslpdy+grgwhesrkqvmk+fgglk+syymdpqpss++ewhl+eyein++++lal TRIDC1BG056660.2 163 WNAHELFDLSLLEGESLREWLFFDRPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKKSYYMDPQPSSNYEWHLFEYEINDSNTLAL 255 ********************************************************************************************* PP VOZ 183 yrlelklvdekksakgkvskdsladlqkklgrlta 217 yrle+k +d k+s+k+k+ ++sl+++q+++++l+a TRIDC1BG056660.2 256 YRLEFKASDPKRSVKSKLGSSSLNEIQQQMVKLSA 290 *********************************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 390 aa Download sequence |
MYYIDHELSI DDFLHGSNPD GLNNQPEHQQ FNLPLDLQHS NSSYADANNS VQSTGDVFFH 60 MSDLLTTVSP SPSQYLGPKC ALWDCGRPVR GSEECQDYCN PYHAGLALND DGLLGTMGTR 120 PVMRPRGIDL KDGPLFDALC AKVQGKNVGI PVCVGAATSK SPWNAHELFD LSLLEGESLR 180 EWLFFDRPRR AFESGNRKQR SLPDYNGRGW HESRKQVMKD FGGLKKSYYM DPQPSSNYEW 240 HLFEYEINDS NTLALYRLEF KASDPKRSVK SKLGSSSLNE IQQQMVKLSA NSPVDNKRGA 300 RSKTKATQKD TNANTYPALK TTNQAGASNA YEAVPLNIIP NQASASNAYQ AVAPSIPNQD 360 STSNAYEDAS QVDPMSYLNE NVVYGPHLPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-107 | VOZ family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1BG056660.2 |