PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG054320.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 222aa    MW: 24452.6 Da    PI: 7.0451
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG054320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.7e-164192255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr++ + g+Wv+e+r+p+   k  r +lg+f tae+Aa+a++aa ++l g
  TRIDC1BG054320.1 41 LYRGVRRRGRVGQWVCEVRVPRV--KGSRLWLGTFTTAEMAARAHDAAVLALSG 92
                      69******************944..34*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MDVADAAFRS SQQEQGHRTV SSEPPKRPAG RTKFHETRHP LYRGVRRRGR VGQWVCEVRV  60
PRVKGSRLWL GTFTTAEMAA RAHDAAVLAL SGRAACLNFA DSAWRMLPVL AAGSFGFRSA  120
REIKLAVAVA VVAFQQQQNI PPAACPTAEP AASPSNSLFY MSSGDLLELD EEHWFGGMDA  180
GSYYDSLAQG MLVEPPDDRA RREDVEQTGV ETPTPLWSYL FD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.15e-26ERF family protein