PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG053090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 24700.5 Da PI: 8.9955 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.2 | 3.1e-21 | 37 | 88 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr ++ +gr++AeIrdp k+ r++lg+++taeeAa+a++aa+++++g+ TRIDC1BG053090.1 37 PHYRGVRKRP-WGRYAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREYRGN 88 68********.**********83...36**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MAPRTSDKTA TPPAAGAAVT GLALGVGGGG NGGGVGPHYR GVRKRPWGRY AAEIRDPAKK 60 SRVWLGTYDT AEEAARAYDA AAREYRGNKA KTNFPFASAS APPAAAALTG DGSRSSNSST 120 VESFGGDVQA PMQAMPLPPS LDLDLFHRAA TSTAGAGAGA GAGAGMRFPF SGYPVSHPYY 180 FFGQAAAAAA GGCHMYSQAP KVTVASVSPS DSDSSSVVDL APSPPSRKPV PFDLDLNCPP 240 PAEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53170.1 | 4e-16 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG053090.1 |