PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG052310.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 64aa MW: 7182.45 Da PI: 9.2434 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 47.3 | 4.5e-15 | 4 | 59 | 18 | 73 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrt 73 ++++P rikki++adedv +i+ +Pvl+ska elf+ +l r+++ + e+ +t TRIDC1BG052310.3 4 DTRFPAPRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYNITVEKGVKT 59 5789*******************************************999976554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 64 aa Download sequence |
KKLDTRFPAP RIKKIMQADE DVGKIALAVP VLVSKALELF LQDLCDRTYN ITVEKGVKTE 60 TVHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12480.1 | 2e-33 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG052310.3 |