PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG051990.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 277aa MW: 30470.2 Da PI: 6.7224

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG051990.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.5e-32	56	110	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l +m+v+g+t++hvkSHLQkYRl TRIDC1BG051990.6 56 KQRLRWTSDLHSRFVDAIAQLGGPDRATPKGVLTVMGVPGITIYHVKSHLQKYRL 110 79****************************************************8 PP
2	Myb_DNA-binding	51.6	2.2e-16	58	109	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++ ++vda++qlGg+ t+k + mg g t +++ks++qky+ TRIDC1BG051990.6 58 RLRWTSDLHSRFVDAIAQLGGPdraTPKGVLTVMGvPGITIYHVKSHLQKYR 109 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
LSSSCDLEST LMMYHAKKFS VPFAPQRAQN SEHVSNIGAF SGSNISNPAN PVGSGKQRLR 60 WTSDLHSRFV DAIAQLGGPD RATPKGVLTV MGVPGITIYH VKSHLQKYRL AKYIPESPAE 120 GSKDEKKDSS DSFSNADSAP GSQINEGLKM QMEVQKRLHE QLEVQKQLQL RIEAQGKYLQ 180 MIIEEQQKLG GSLEGSEERK LSHSPPTLDD YPDSIQPSPK KSRLDDLSTD AVRGVAQPGF 240 ESHLIGPWDQ ELCPKTNICD PAFQVDEFKA NPGLSKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-64	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG051990.6