PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050930.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 268aa    MW: 30493 Da    PI: 9.1002
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050930.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.41.3e-18124210193
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k++++s+v++  +l lp +f+++h  ++ ++ +++lede+g +++  +   +++ +  l++GW++F   ++L++gD++vF+l + ++f+ +
  TRIDC1BG050930.5 124 FVKTMVRSHVSSCFWLGLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRFKIY 210
                       89*********************9994.44.4459***************..555444..***********************9876777444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
AFRDDTHCRF VSGFFAVDLG ISKMAKSLIQ ATRQQDKVRR ASPKSRKKFE ATTEVRRSSR  60
ARTTVSYKDD FPELDDFVRR RRVSKSVDNG RGYTGRISSY QQQQRAFKRA EKLQDSLDPD  120
NPSFVKTMVR SHVSSCFWLG LPSSFCKDHL PPREHKMVLE DEEGVEFDAV YIGNRTGLSG  180
GWRGFSMHHD LEDGDSLVFE LAEPDRFKIY ISKAIEDGKE AEPNDKNADV DSDSAQEVPD  240
QTDSPVSEPP SSPEPLKGAK RRKLRGRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1256262LKGAKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.14e-42B3 family protein