PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050930.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 197aa    MW: 22113.6 Da    PI: 5.6885
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050930.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.36.7e-1953139193
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k++++s+v++  +l lp +f+++h  ++ ++ +++lede+g +++  +   +++ +  l++GW++F   ++L++gD++vF+l + ++f+ +
  TRIDC1BG050930.4  53 FVKTMVRSHVSSCFWLGLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRFKIY 139
                       99*********************9994.44.4459***************..555444..***********************9876777444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MVIGYSPLLT RVSKSVDNGR GYTGRISSYQ QQQRAFKRAE KLQDSLDPDN PSFVKTMVRS  60
HVSSCFWLGL PSSFCKDHLP PREHKMVLED EEGVEFDAVY IGNRTGLSGG WRGFSMHHDL  120
EDGDSLVFEL AEPDRFKIYI SKAIEDGKEA EPNDKNADVD SDSAQEVPDQ TDSPVSEPPS  180
SPEPLKGAKR RKLRGRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185191LKGAKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.15e-43B3 family protein