PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG050580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 287aa MW: 31918.4 Da PI: 6.1787

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG050580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	61	2.2e-19	133	194	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 +D ++WrKYG K++ ++fpr YYrC ++ +Cp+kk v+++ ++dp ++ +t ++H+++ TRIDC1BG050580.1 133 NDRFHWRKYGEKKILHADFPRLYYRCGYSdehKCPAKKYVQQQnSSDPPMFLVTLINDHTCD 194 79***********************998899***875167***********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MALRPKSEML RPPAPSDQRD AVIEELRKGS QLAEFLGQQV ELIAEDSRRD AALANVSDIT 60 TALASSLSVL QSEKEQYSSS SSSYDPGHAS GASGGGMRNG PAARSRNRKA KHRRGTYGEG 120 LPIKEILTEA PENDRFHWRK YGEKKILHAD FPRLYYRCGY SDEHKCPAKK YVQQQNSSDP 180 PMFLVTLIND HTCDTLFPDE DQDQPPSSSS SPNNSQVLDF SKASLSSAVG VSRLKKEEDA 240 DMSVTVPSYN YTYDELSSSS LPFLSPKQWE MEMEVKSLFR RHSGDGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	114	NRKAKHRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	4e-17	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG050580.1