PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050230.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 601aa    MW: 67191.6 Da    PI: 6.4682
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050230.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.61.7e-11153238998
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +lk + + lp k +e+++++ +++ t++le ++ + + v+   +k+++  +vl+ GW++ v+an+++e+D ++F  +g  +++l v+++ 
  TRIDC1BG050230.6 153 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDNIYGVEA--CKHGDDqIVLQYGWSNLVDANRIQENDLLIFITKG--KKRLEVRILG 238
                       45678999*******777666.5678****************..5555545*************************655..5556887765 PP
2B337.73.8e-12499596399
                       EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesg...rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                        +l++++  +++ l + k++ +++  ++  + + l+l++e +   +  +v +  ++++ + ++++GWk+Fv +n+++egD+ +F++ ++ ++ 
  TRIDC1BG050230.6 499 VALMTKSRINTHHLDVCKEYGSRYiPHI-SRRMRLVLQSEGStteQPAKVVI--NQNG-MRWIRSGWKKFVADNDVQEGDIALFERAKStKKL 587
                       5677777788888********9997444.46688999997765444444444..6655.5589**********************99877999 PP

                       ..EEEEE-S CS
                B3  91 elvvkvfrk 99 
                       +++v ++rk
  TRIDC1BG050230.6 588 RMTVYFVRK 596
                       999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    
MISETIKLEA PNGIFCIGVC RKPGELVLQS GWDKFVAMHH VEENYSFWFV YRGNSTFKVH  60
IFNPNGREKA SSCSQPPSQS FGGVPPGAIC DHHVLNEQLL SDPGHVQTST DSGYSTLPGC  120
HLTKAQDEKV REIACTMRSQ VPLYVAVMNK SNVNLKDCSV NLPLKLVEHF KEDTSKATIQ  180
LEAPNDNIYG VEACKHGDDQ IVLQYGWSNL VDANRIQEND LLIFITKGKK RLEVRILGTS  240
VHQRTSSCFN TGNISSTQEI CEDSLEITDP TPHTDYYVSS SDDDHIVEEG TRKSCYYVSS  300
SDDDHIVEEG YYVSSSDDDH IVGEGTRKSC YYVSSSDDDH IVEEGTRKSC YYVSCSDAHD  360
IVEEGTRKSC RRQKQAPSHC AKAQKVASTS SPSAAKSGYN AIFMCVFFLL STSKLLLVML  420
CLSYEGCASF SGYEAHTLNE RASVEFGVDL EPHSSTSNLK GPSQHPYILS EKGTPLTNVE  480
KKKVEEKVQA IQSELPIFVA LMTKSRINTH HLDVCKEYGS RYIPHISRRM RLVLQSEGST  540
TEQPAKVVIN QNGMRWIRSG WKKFVADNDV QEGDIALFER AKSTKKLRMT VYFVRKSDIE  600
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.19e-08B3 family protein