PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG050230.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | B3 | ||||||||
Protein Properties | Length: 526aa MW: 58821.1 Da PI: 6.7849 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.9 | 1.4e-11 | 153 | 238 | 9 | 98 |
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +lk + + lp k +e+++++ +++ t++le ++ + + v+ +k+++ +vl+ GW++ v+an+++e+D ++F +g +++l v+++ TRIDC1BG050230.5 153 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDNIYGVEA--CKHGDDqIVLQYGWSNLVDANRIQENDLLIFITKG--KKRLEVRILG 238 45678999*******777666.5678****************..5555545*************************655..5556887765 PP | |||||||
2 | B3 | 38 | 3e-12 | 425 | 522 | 3 | 99 |
EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesg...rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +l++++ +++ l + k++ +++ ++ + + l+l++e + + +v + ++++ + ++++GWk+Fv +n+++egD+ +F++ ++ ++ TRIDC1BG050230.5 425 VALMTKSRINTHHLDVCKEYGSRYiPHI-SRRMRLVLQSEGStteQPAKVVI--NQNG-MRWIRSGWKKFVADNDVQEGDIALFERAKStKKL 513 5677777888888********9997444.46688999997765444444444..6655.5589**********************99877999 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 +++v ++rk TRIDC1BG050230.5 514 RMTVYFVRK 522 999999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 526 aa Download sequence |
MISETIKLEA PNGIFCIGVC RKPGELVLQS GWDKFVAMHH VEENYSFWFV YRGNSTFKVH 60 IFNPNGREKA SSCSQPPSQS FGGVPPGAIC DHHVLNEQLL SDPGHVQTST DSGYSTLPGC 120 HLTKAQDEKV REIACTMRSQ VPLYVAVMNK SNVNLKDCSV NLPLKLVEHF KEDTSKATIQ 180 LEAPNDNIYG VEACKHGDDQ IVLQYGWSNL VDANRIQEND LLIFITKGKK RLEVRILGTS 240 VHQRTSSCFN TGNISSTQEI CEDSLEITDP TPHTDYYVSS SDDDHIVEEG TRKSCYYVSS 300 SDDDHIVEEG YYVSSSDDDH IVGEGTRKSC RRQKQAPSHC AKAQKVASTS SPSAAKSGYE 360 AHTLNERASV EFGVDLEPHS STSNLKGPSQ HPYILSEKGT PLTNVEKKKV EEKVQAIQSE 420 LPIFVALMTK SRINTHHLDV CKEYGSRYIP HISRRMRLVL QSEGSTTEQP AKVVINQNGM 480 RWIRSGWKKF VADNDVQEGD IALFERAKST KKLRMTVYFV RKSDIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 6e-08 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG050230.5 |