PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050230.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 650aa    MW: 72694.1 Da    PI: 6.9275
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050230.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.41.9e-11236321998
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +lk + + lp k +e+++++ +++ t++le ++ + + v+   +k+++  +vl+ GW++ v+an+++e+D ++F  +g  +++l v+++ 
  TRIDC1BG050230.4 236 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDNIYGVEA--CKHGDDqIVLQYGWSNLVDANRIQENDLLIFITKG--KKRLEVRILG 321
                       45678999*******777666.5678****************..5555545*************************655..5556887765 PP
2B337.54.2e-12548645399
                       EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesg...rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                        +l++++  +++ l + k++ +++  ++  + + l+l++e +   +  +v +  ++++ + ++++GWk+Fv +n+++egD+ +F++ ++ ++ 
  TRIDC1BG050230.4 548 VALMTKSRINTHHLDVCKEYGSRYiPHI-SRRMRLVLQSEGStteQPAKVVI--NQNG-MRWIRSGWKKFVADNDVQEGDIALFERAKStKKL 636
                       5677777788888********9997444.46688999997765444444444..6655.5589**********************99877999 PP

                       ..EEEEE-S CS
                B3  91 elvvkvfrk 99 
                       +++v ++rk
  TRIDC1BG050230.4 637 RMTVYFVRK 645
                       999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 650 aa     Download sequence    
STNRSGRRST DGLNQHNHQV GAAAVARGEE RRSARGSCTM SMWRQHYHRG HTGHDKEHFF  60
AVASGDFTRS MCIPWEVGNH LGSMISETIK LEAPNGIFCI GVCRKPGELV LQSGWDKFVA  120
MHHVEENYSF WFVYRGNSTF KVHIFNPNGR EKASSCSQPP SQSFGGVPPG AICDHHVLNE  180
QLLSDPGHVQ TSTDSGYSTL PGCHLTKAQD EKVREIACTM RSQVPLYVAV MNKSNVNLKD  240
CSVNLPLKLV EHFKEDTSKA TIQLEAPNDN IYGVEACKHG DDQIVLQYGW SNLVDANRIQ  300
ENDLLIFITK GKKRLEVRIL GTSVHQRTSS CFNTGNISST QEICEDSLEI TDPTPHTDYY  360
VSSSDDDHIV EEGTRKSCYY VSSSDDDHIV EEGYYVSSSD DDHIVGEGTR KSCYYVSSSD  420
DDHIVEEGTR KSCYYVSCSD AHDIVEEGTR KSCRRQKQAP SHCAKAQKVA STSSPSAAKS  480
GYEAHTLNER ASVEFGVDLE PHSSTSNLKG PSQHPYILSE KGTPLTNVEK KKVEEKVQAI  540
QSELPIFVAL MTKSRINTHH LDVCKEYGSR YIPHISRRMR LVLQSEGSTT EQPAKVVINQ  600
NGMRWIRSGW KKFVADNDVQ EGDIALFERA KSTKKLRMTV YFVRKSDIEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.13e-09B3 family protein