PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050230.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 611aa    MW: 68560.7 Da    PI: 6.6463
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.51.7e-11197282998
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +lk + + lp k +e+++++ +++ t++le ++ + + v+   +k+++  +vl+ GW++ v+an+++e+D ++F  +g  +++l v+++ 
  TRIDC1BG050230.1 197 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDNIYGVEA--CKHGDDqIVLQYGWSNLVDANRIQENDLLIFITKG--KKRLEVRILG 282
                       45678999*******777666.5678****************..5555545*************************655..5556887765 PP
2B337.63.9e-12509606399
                       EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesg...rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                        +l++++  +++ l + k++ +++  ++  + + l+l++e +   +  +v +  ++++ + ++++GWk+Fv +n+++egD+ +F++ ++ ++ 
  TRIDC1BG050230.1 509 VALMTKSRINTHHLDVCKEYGSRYiPHI-SRRMRLVLQSEGStteQPAKVVI--NQNG-MRWIRSGWKKFVADNDVQEGDIALFERAKStKKL 597
                       5677777788888********9997444.46688999997765444444444..6655.5589**********************99877999 PP

                       ..EEEEE-S CS
                B3  91 elvvkvfrk 99 
                       +++v ++rk
  TRIDC1BG050230.1 598 RMTVYFVRK 606
                       999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    
MSMWRQHYHR GHTGHDKEHF FAVASGDFTR SMCIPWEVGN HLGSMISETI KLEAPNGIFC  60
IGVCRKPGEL VLQSGWDKFV AMHHVEENYS FWFVYRGNST FKVHIFNPNG REKASSCSQP  120
PSQSFGGVPP GAICDHHVLN EQLLSDPGHV QTSTDSGYST LPGCHLTKAQ DEKVREIACT  180
MRSQVPLYVA VMNKSNVNLK DCSVNLPLKL VEHFKEDTSK ATIQLEAPND NIYGVEACKH  240
GDDQIVLQYG WSNLVDANRI QENDLLIFIT KGKKRLEVRI LGTSVHQRTS SCFNTGNISS  300
TQEICEDSLE ITDPTPHTDY YVSSSDDDHI VEEGTRKSCY YVSSSDDDHI VEEGYYVSSS  360
DDDHIVGEGT RKSCYYVSSS DDDHIVEEGT RKSCYYVSCS DAHDIVEEGT RKSCRRQKQA  420
PSHCAKAQKV ASTSSPSAAK SGYEAHTLNE RASVEFGVDL EPHSSTSNLK GPSQHPYILS  480
EKGTPLTNVE KKKVEEKVQA IQSELPIFVA LMTKSRINTH HLDVCKEYGS RYIPHISRRM  540
RLVLQSEGST TEQPAKVVIN QNGMRWIRSG WKKFVADNDV QEGDIALFER AKSTKKLRMT  600
VYFVRKSDIE V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.13e-09B3 family protein