PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038830.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 371aa    MW: 40343.8 Da    PI: 4.6466
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038830.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-19119169155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +g++GVr++  +g+WvAeIr+p   + r  r +lg+f tae+Aa a+++a+++++g
  TRIDC1BG038830.7 119 CGFRGVRQRT-WGKWVAEIREP---N-RvSRLWLGTFPTAEDAACAYDEAARAMYG 169
                       79*****999.**********8...2.58************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
PNLSSEVDAA KKSGDKIANA RYLDPIRVGS AMTVDRKDAE AAAAAAPFEI PALQPGRKKR  60
PRRSRDGPNS VSETIRRWKE VNQQLEHDPQ GAKRARKPPA KGSKKGCMQG KGGPENTQCG  120
FRGVRQRTWG KWVAEIREPN RVSRLWLGTF PTAEDAACAY DEAARAMYGA LARTNFPVHP  180
AQAPAVAVAA AIEGVVRGAS ASCESTTTST NHSDVASSLP RQAQALEIYS QPDVLESTES  240
VVLTPVEHYS HQDSVPDAGS SIARSTSEED VFEPLEPISS LPDGESDGFD IEELLRLMEA  300
DPIEVEPVNG GSWNGVEIGQ QEPLYLDGLD QGMLEGMLQS DYPYPMWISE DRAMHNPAFH  360
DAEMSEFFEG L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-35ERF family protein