PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038830.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 339aa    MW: 37461.4 Da    PI: 4.7739
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038830.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-1987137155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +g++GVr++  +g+WvAeIr+p   + r  r +lg+f tae+Aa a+++a+++++g
  TRIDC1BG038830.6  87 CGFRGVRQRT-WGKWVAEIREP---N-RvSRLWLGTFPTAEDAACAYDEAARAMYG 137
                       79*****999.**********8...2.58************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
RRSSLEENLW SRGKYPESCS RQTNRKKRPR RSRDGPNSVS ETIRRWKEVN QQLEHDPQGA  60
KRARKPPAKG SKKGCMQGKG GPENTQCGFR GVRQRTWGKW VAEIREPNRV SRLWLGTFPT  120
AEDAACAYDE AARAMYGALA RTNFPVHPAQ APAVAVAAAI EGVVRGASAS CESTTTSTNH  180
SDVASSLPRQ AQALEIYSQP DVLESTESVV LTPVEHYSHQ DSVPDAGSSI ARSTSEEDVF  240
EPLEPISSLP DGESDGFDIE ELLRLMEADP IEVEPVNGGS WNGVEIGQQE PLYLDGLDQG  300
MLEGMLQSDY PYPMWISEDR AMHNPAFHDA EMSEFFEGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.16e-36ERF family protein