PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038520.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 365aa    MW: 39017.7 Da    PI: 8.1341
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038520.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.61.4e-13143187347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ +++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  TRIDC1BG038520.1 143 PWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKY 187
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
QSPPLLSSPL PSPLLSSPPH FASPPSPPLL SPSGARGRLV PTPAGALAAP GMTRRCSHCS  60
HNGHNSRTCP NRGVKIFGVR LTDGSIRKSA SMGNLSLLGG STSGGGGASP ADVGHDAAAE  120
GYASDDFVQG SSSANRERKK GVPWTEEEHR RFLLGLQKLG KGDWRGISRN FVVSRTPTQV  180
ASHAQKYFIR QANMSRRKRR SSLFDLVPDE SDLPPLPGNQ EPEAQILNHP PLPPPMEEEE  240
VESMESDTSV IAESSSASAI MPENLQSSYP VLVPAYFSPF LQFSVPFWQN QNDGDDLGQG  300
THEIVKPVPV HSKSPINVDE LVGMSKLSIG DPKQDTVSTS LSLKMVGGQN RQSAFQANLP  360
TRAQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.18e-76MYB_related family protein