PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG037970.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 230aa MW: 25227.6 Da PI: 10.3089 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 32.9 | 1.7e-10 | 2 | 62 | 30 | 86 |
trihelix 30 lWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ev+ ++ + +s +qC++k+e+l+kry+++++++ +r+++ ++p+f l+ TRIDC1BG037970.3 2 DWDEVAGAVtarcgrFPTATYKSGVQCRHKIEKLRKRYRAERTRSMGRSKG--PKWPFFPLLH 62 6999999998877776677889************************98443..47****9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
ADWDEVAGAV TARCGRFPTA TYKSGVQCRH KIEKLRKRYR AERTRSMGRS KGPKWPFFPL 60 LHDLAGGGVP DASPNPIIKI KPRGNATPAS PSPVSSPSSE DAGRSRSLHG LISNGGGGSG 120 LRFTIPKASR TKPGVPREAR PDRDRGEEDP EAEAMTEVAS ALRAVGEGFL RMEERRLELS 180 LQMEKERMES EMKRTQALLD AQQLFVEAFL GKQQPHHKKL VSSAAAMEED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24860.1 | 7e-12 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG037970.3 |