PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG025500.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 226aa    MW: 25190.8 Da    PI: 7.1283
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG025500.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP52.86.4e-1722573771
            E2F_TDP 37 e..dvknkrRRiYDilNVLealnliekkekneirwkg 71
                       +  d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC1BG025500.12 22 QqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 57
                       13489**********************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MATPSGQLFV MCNVLIVCKI QQQYDEKNIR RRVYDALNVL MAMDIISKDK KEIQWKGLPR  60
TSLSDIDKLK TEVIGLKGRI DKKSAYLQEL QDQYVGLQNL VERNEQLYGS GDAPSGGVAL  120
PFILVQTRPH ATVEVEISED MQLVHFDFNS TPFELHDDSF VLKAMGFSGK EETDGTVALV  180
ANAVECSSAS NVYGHRSPQP ARPNGIRLRT SPPIPGILKG RVKHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.21e-91E2F/DP family protein