PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG014640.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 431aa    MW: 47466 Da    PI: 6.6951
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG014640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.8e-171461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l + ++++G g+W+++++  g+ R++k+c++rw +yl
  TRIDC1BG014640.1 14 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
                      678*******************************************97 PP
2Myb_DNA-binding43.95.5e-1467110146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg++ ++E++l+v++++ lG++ W+ Ia+ m+ gRt++++k+ w++
  TRIDC1BG014640.1  67 RGAFAQDEEDLIVELHAVLGNR-WSQIAAQMP-GRTDNEIKNLWNS 110
                       79999*****************.*********.*********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF AQDEEDLIVE LHAVLGNRWS QIAAQMPGRT DNEIKNLWNS SLKKKLRQKG  120
IDPNTHKPLT EADRSGAAPT ISTERTSGSS DVNPSSAGAQ GNFGHLLSET AQSSMLLPVY  180
DKKHPETPSL ARPKVPAKEL FLDQLTAGHE SPSSCRSSGP TLYFPFQQQL GYSNECGSGD  240
GANMNMNSLW FNQNDFNCST ISTVMPTVSP SALSTPMGLN LPPDNHRHGG TGIGSAPFYW  300
GGVNPSSSGS TGSSGSNSMG FEPQSTNSIL ENSVFPWTDI GVGQEKDTRV QLVEELKWPD  360
LLHGTFAEAT TAMQNQSQSL YDDVIKAESQ FNMEGICASW FQNQQPQQQL QAASDMYDKD  420
LQRMPLSFEH I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09540.12e-79MYB family protein