PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG012380.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 321aa MW: 36364.9 Da PI: 6.455

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG012380.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	63.7	4e-20	51	119	1	68
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikege 68 +W++ e+ a +++r ++++++ ++k++k+lWe+vs+++ +++gf r+p qCk+kw+nl +r+k ++ + TRIDC1BG012380.4 51 QWSHAETAAFLAIRADLDHSFLSTKRNKALWEAVSARLnAQGGFARTPDQCKSKWKNLVTRFKGTASDA 119 7***********************************88999******************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MDPFHHLNTA FSNPYHPLLS SSPPHPYHPP PPLPPXXXXX XXXXXRERLP QWSHAETAAF 60 LAIRADLDHS FLSTKRNKAL WEAVSARLNA QGGFARTPDQ CKSKWKNLVT RFKGTASDAQ 120 PEDGYHHAGA AARGSFPFHD EMRRIFDARV ERARALEAKK VKGKEAAARR DPDDDGGGEG 180 DEGEDDEEEA EMFDEEEGRA DAETRGAGRK RRRKAAPART ASAGGGVEIG EVEAVLREFM 240 RRQMEMEERW MEAAEARDAE RRAREEEWRA AMVALGEERL ALVRRWRERE DAWRARAEER 300 EERRHQLVAA LLAKLGGDTS S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	213	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	3e-30	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG012380.4