PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG012380.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 333aa MW: 37791.5 Da PI: 6.455 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 63.6 | 4.3e-20 | 63 | 131 | 1 | 68 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikege 68 +W++ e+ a +++r ++++++ ++k++k+lWe+vs+++ +++gf r+p qCk+kw+nl +r+k ++ + TRIDC1BG012380.3 63 QWSHAETAAFLAIRADLDHSFLSTKRNKALWEAVSARLnAQGGFARTPDQCKSKWKNLVTRFKGTASDA 131 7*************************************88999********************998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MDPFHHLNTA FSNPYHPLLS SSPPHPYHPP PPLPPXXXXX XXXXXXXXXX XXXXXXXRER 60 LPQWSHAETA AFLAIRADLD HSFLSTKRNK ALWEAVSARL NAQGGFARTP DQCKSKWKNL 120 VTRFKGTASD AQPEDGYHHA GAAARGSFPF HDEMRRIFDA RVERARALEA KKVKGKEAAA 180 RRDPDDDGGG EGDEGEDDEE EAEMFDEEEG RADAETRGAG RKRRRKAAPA RTASAGGGVE 240 IGEVEAVLRE FMRRQMEMEE RWMEAAEARD AERRAREEEW RAAMVALGEE RLALVRRWRE 300 REDAWRARAE EREERRHQLV AALLAKLGGD TSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 221 | 225 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01380.1 | 4e-30 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG012380.3 |