PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG012380.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 327aa MW: 37330 Da PI: 5.8099

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG012380.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	63.7	4.2e-20	57	125	1	68
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikege 68 +W++ e+ a +++r ++++++ ++k++k+lWe+vs+++ +++gf r+p qCk+kw+nl +r+k ++ + TRIDC1BG012380.2 57 QWSHAETAAFLAIRADLDHSFLSTKRNKALWEAVSARLnAQGGFARTPDQCKSKWKNLVTRFKGTASDA 125 7***********************************88999******************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ERERLPQWSH 60 AETAAFLAIR ADLDHSFLST KRNKALWEAV SARLNAQGGF ARTPDQCKSK WKNLVTRFKG 120 TASDAQPEDG YHHAGAAARG SFPFHDEMRR IFDARVERAR ALEAKKVKGK EAAARRDPDD 180 DGGGEGDEGE DDEEEAEMFD EEEGRADAET RGAGRKRRRK AAPARTASAG GGVEIGEVEA 240 VLREFMRRQM EMEERWMEAA EARDAERRAR EEEWRAAMVA LGEERLALVR RWREREDAWR 300 ARAEEREERR HQLVAALLAK LGGDTSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	215	219	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	5e-30	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG012380.2