PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG012380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 337aa MW: 37839.9 Da PI: 6.3094 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 63.6 | 4.4e-20 | 67 | 135 | 1 | 68 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikege 68 +W++ e+ a +++r ++++++ ++k++k+lWe+vs+++ +++gf r+p qCk+kw+nl +r+k ++ + TRIDC1BG012380.1 67 QWSHAETAAFLAIRADLDHSFLSTKRNKALWEAVSARLnAQGGFARTPDQCKSKWKNLVTRFKGTASDA 135 7*************************************88999********************998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
LCSAFPSTAT ATATTGQAMD PFHHLNTAFS NPYHPLLSSS PPHPYHPPPP LPXXXXXXXX 60 ERERLPQWSH AETAAFLAIR ADLDHSFLST KRNKALWEAV SARLNAQGGF ARTPDQCKSK 120 WKNLVTRFKG TASDAQPEDG YHHAGAAARG SFPFHDEMRR IFDARVERAR ALEAKKVKGK 180 EAAARRDPDD DGGGEGDEGE DDEEEAEMFD EEEGRADAET RGAGRKRRRK AAPARTASAG 240 GGVEIGEVEA VLREFMRRQM EMEERWMEAA EARDAERRAR EEEWRAAMVA LGEERLALVR 300 RWREREDAWR ARAEEREERR HQLVAALLAK LGGDTSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 225 | 229 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01380.1 | 5e-30 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG012380.1 |