PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG010030.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 452aa MW: 49811.6 Da PI: 8.4516

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG010030.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.5e-17	124	173	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC1BG010030.9 124 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 173 78*****************......55**********************997 PP
2	AP2	40.5	6.9e-13	216	266	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+a+++a+ k +g TRIDC1BG010030.9 216 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAARAYDKAAIKCNG 266 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
SILRSSASAE GENDVGADDD EEEATPSPLP PPPRHYHQHL LQPQQLVTQE LFPAAATAGG 60 PPPMSVPQHW AELGFFRPAA PPPDMRILQM QQQQLQVHAQ PPPPPAAQPP VAKKSRRGPR 120 SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF 180 NLSDYEDDMK QMKGLSKEEF VHVLRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK 240 YIYLGLFDNE VEAARAYDKA AIKCNGREAV TNFEPSTYDA ELLSEVAAEG ADVDLNLSIS 300 QPTSQSPKRD KSSLGLQLHH GSYEGSELKR PKVDAPPEMV AIPHRYPLLT EHPPIWHGQS 360 YPIFLNNEDA ARDHSRRPEV ATGGVPTWAW RVSHPPPTQP MPLFSSSSSA AASSGFSKTA 420 AAAAPGAPSA SFRFDPMAPS SSSSNQHHHH PR

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

SILRSSASAE GENDVGADDD EEEATPSPLP PPPRHYHQHL LQPQQLVTQE LFPAAATAGG  60
PPPMSVPQHW AELGFFRPAA PPPDMRILQM QQQQLQVHAQ PPPPPAAQPP VAKKSRRGPR  120
SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF  180
NLSDYEDDMK QMKGLSKEEF VHVLRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK  240
YIYLGLFDNE VEAARAYDKA AIKCNGREAV TNFEPSTYDA ELLSEVAAEG ADVDLNLSIS  300
QPTSQSPKRD KSSLGLQLHH GSYEGSELKR PKVDAPPEMV AIPHRYPLLT EHPPIWHGQS  360
YPIFLNNEDA ARDHSRRPEV ATGGVPTWAW RVSHPPPTQP MPLFSSSSSA AASSGFSKTA  420
AAAAPGAPSA SFRFDPMAPS SSSSNQHHHH PR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-101	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG010030.9