PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG010030.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 313aa MW: 34372.4 Da PI: 8.5843

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG010030.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22.3	3.3e-07	1	34	17	55
AP2 17 AeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 A +rd + k+++lg f+ta Aa+a+++a+ k++g TRIDC1BG010030.8 1 AKCRD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 34 66788......55************************997 PP
2	AP2	41.2	4e-13	77	127	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+a+++a+ k +g TRIDC1BG010030.8 77 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAARAYDKAAIKCNG 127 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
AKCRDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FNLSDYEDDM KQMKGLSKEE 60 FVHVLRRQST GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KYIYLGLFDN EVEAARAYDK 120 AAIKCNGREA VTNFEPSTYD AELLSEVAAE GADVDLNLSI SQPTSQSPKR DKSSLGLQLH 180 HGSYEGSELK RPKVDAPPEM VAIPHRYPLL TEHPPIWHGQ SYPIFLNNED AARDHSRRPE 240 VATGGVPTWA WRVSHPPPTQ PMPLFSSSSS AAASSGFSKT AAAAAPGAPS ASFRFDPMAP 300 SSSSSNQHHH HPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	6e-86	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG010030.8