PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG009160.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 264aa    MW: 28711.3 Da    PI: 8.4641
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG009160.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.72.7e-201978357
                      --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      +R+++t+eql +Lee+++   r+p+a+++++++++l    +++ ++V++WFqN++a++++
  TRIDC1BG009160.2 19 TRWCPTPEQLMILEEMYRGgLRTPNASQIQQITAHLahygRIEGKNVFYWFQNHKARDRQ 78
                      8*****************99*************************************996 PP
2Wus_type_Homeobox119.51.4e-381879364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +tRW+PtpeQ++iLee+y+ GlrtPn+++iq+ita+L++yG+ie+kNVfyWFQN+kaR+rqk
   TRIDC1BG009160.2 18 TTRWCPTPEQLMILEEMYRGGLRTPNASQIQQITAHLAHYGRIEGKNVFYWFQNHKARDRQK 79
                       79***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MAATATATTA ATSVVTGTTR WCPTPEQLMI LEEMYRGGLR TPNASQIQQI TAHLAHYGRI  60
EGKNVFYWFQ NHKARDRQKL RRRLCMSRHL LSCAHYYAAA NAGQYHHQQQ LLGAGAVPPP  120
LLQHQQQQQY YSASCAGGSY DQHLLPTTVP ASAYAAAAAG YAYPFAAVPA SRCADPSPPN  180
TPLSFHHQGG GVVGSPEYSL GRLGNFGVVD DTCRPSRYEQ QPQQLAVATE DQAAPVTATG  240
LFCRPLKTLD LFPGAIKEEQ RDVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.11e-39WOX family protein