PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG005390.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 231aa    MW: 26625.2 Da    PI: 8.7831
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG005390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.81.1e-1529108190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ +vGF +r sks+ + +++   +++ vC + gk+e+e+++         +tr+gC a++++ +++d+ w++++ +  HnH+l+
  TRIDC1BG005390.1  29 QFYNLYSWQVGFGIRYSKSRLN-MERVKCMQEIVCGCAGKPERENTR---------STRCGCAARIRLLRSDDNGWYISEHRPLHNHSLS 108
                       6****************99998.666678899*******99887555.........9*******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MRAFISKRDG NVVNPAVGTS FDSLDEAYQF YNLYSWQVGF GIRYSKSRLN MERVKCMQEI  60
VCGCAGKPER ENTRSTRCGC AARIRLLRSD DNGWYISEHR PLHNHSLSST CGEKMHWPSH  120
RLIDRYTKDL IRQLRENNIS LGKVFGIVGS FFGSVDNVPF TKRSLKTLCC KLNKEQSDSD  180
ARKTMDIFAE MKANDPEFNY TVQVDDESRM KTLVWVNGRS VEQYRCFGDV V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-19FAR1 family protein