PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG000730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 226aa MW: 25147.6 Da PI: 9.7161 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.1 | 2.7e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed+ l+++++ +G g+W++ ++ g+ R++k+c++rw +yl TRIDC1BG000730.1 14 RGKWTAKEDDTLAKYIAGHGEGSWRSLPKNAGLLRCGKSCRLRWVNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 57.7 | 2.6e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++++eEd+l+v++++ lG+ W++Ia++++ gRt++++k++w+ + TRIDC1BG000730.1 67 RGNFSKEEDDLIVKLHATLGNT-WSLIASHLP-GRTDNEIKNYWNAH 111 89******************99.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MGRAPCCEKV GLKRGKWTAK EDDTLAKYIA GHGEGSWRSL PKNAGLLRCG KSCRLRWVNY 60 LRDGVRRGNF SKEEDDLIVK LHATLGNTWS LIASHLPGRT DNEIKNYWNA HLSRQIHSFR 120 RMYTAGKETT ITIDMNKLST ASKRRGGRAP RSSTKKQPVL EPTKSMECSR PVGDMSSSTS 180 SLPQGNSETM LDQNQPITII TNDTACSEEP MIMDPIDLNG GVLEPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 4e-71 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG000730.1 |