PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG064060.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 442aa MW: 50143.8 Da PI: 6.5435

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG064060.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.2	2.5e-24	120	216	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyf 82 +Wt ++v++Li+a ++++e+ +++ +kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++t ++++ + +++ TRIDC1AG064060.1 120 KWTGSMVKLLITAASYTGEDPGADLgggrrnitvmQKKGKWKAISKVMGERGCNVSPQQCEDKFNDLNKRYKRLTDILGRGTaCNVVDNPALL 212 7*******************8744455667777********************************************548998888888 PP trihelix 83 dqle 86 d ++ TRIDC1AG064060.1 213 DCMN 216 8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MDRSNLPPGN TTQGTPYASL NLHGNSLQMH APSSGKHLFN QSQMPGSFTM PINRATEHDN 60 PGSGFQFVEH GKKDHHQQQQ QHNHLIKNSI SDDEEHDMTE DATDAQSGKG KKGSAWHRMK 120 WTGSMVKLLI TAASYTGEDP GADLGGGRRN ITVMQKKGKW KAISKVMGER GCNVSPQQCE 180 DKFNDLNKRY KRLTDILGRG TACNVVDNPA LLDCMNNLSD KMKEDARKIL NSKHLFYEMM 240 CSYHNNNRVN LPEDLALQHS LQVALRCKEE HDPRRDASGD AEEDDHSADS DYEDHDEEHQ 300 AVHHSMRDPS MNKRMCHALD HGDAGFLTSS SNDGSGSLDP HGIALDINKG FTDGTNLSAV 360 RKELASQAIE LRKRRLQIEA QELEVTEQRL KWERFKRKKD REIERMESEN EEMMLENKRL 420 ELQLKHKELE VELKLKGNPD HE

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MDRSNLPPGN TTQGTPYASL NLHGNSLQMH APSSGKHLFN QSQMPGSFTM PINRATEHDN  60
PGSGFQFVEH GKKDHHQQQQ QHNHLIKNSI SDDEEHDMTE DATDAQSGKG KKGSAWHRMK  120
WTGSMVKLLI TAASYTGEDP GADLGGGRRN ITVMQKKGKW KAISKVMGER GCNVSPQQCE  180
DKFNDLNKRY KRLTDILGRG TACNVVDNPA LLDCMNNLSD KMKEDARKIL NSKHLFYEMM  240
CSYHNNNRVN LPEDLALQHS LQVALRCKEE HDPRRDASGD AEEDDHSADS DYEDHDEEHQ  300
AVHHSMRDPS MNKRMCHALD HGDAGFLTSS SNDGSGSLDP HGIALDINKG FTDGTNLSAV  360
RKELASQAIE LRKRRLQIEA QELEVTEQRL KWERFKRKKD REIERMESEN EEMMLENKRL  420
ELQLKHKELE VELKLKGNPD HE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	372	398	RKRRLQIEAQELEVTEQRLKWERFKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	8e-88	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG064060.1