PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG059930.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 223aa MW: 24092.8 Da PI: 8.951 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.1 | 3.2e-16 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ l+++v+ G g W++ ar g++Rt+k+c++rw++yl TRIDC1AG059930.2 22 KGPWTMEEDLVLANYVAANGEGAWNSLARAAGLNRTGKSCRLRWLNYL 69 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.5 | 6.5e-18 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+v++ +++G++ W++Iar+++ gRt++++k++w++ TRIDC1AG059930.2 75 RGNITPEEHLLIVELQARWGNR-WSKIARHLP-GRTDNEIKNFWRT 118 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
SGTRAPEGRR RTMQCAEPAV RKGPWTMEED LVLANYVAAN GEGAWNSLAR AAGLNRTGKS 60 CRLRWLNYLR PDVRRGNITP EEHLLIVELQ ARWGNRWSKI ARHLPGRTDN EIKNFWRTKI 120 QKKRSGGATA SDSTGCQLPS STAVTESQSS SSNSVGRPGA MPHYDVVTAA TQPGGWGDHQ 180 LGYAVQGGGG AACAGDMDGG VPPEFLQAAA VAGDNFWGLE EFW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 2e-66 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG059930.2 |