PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG059640.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 521aa MW: 56018.1 Da PI: 10.9099

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG059640.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.2	1.1e-30	297	355	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+ TRIDC1AG059640.1 297 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTVLITTYEGNHNHP 355 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
VGLGYGANDG DGERRVVVGE MDFFETEMRK EKRDKKDHAA AGAADGDLGM KPDLTIDMGL 60 HVGGRRRNSG SEESTVDDGV SSNDEDHREA KAELAAAKSE LARVNEENKR LKTMLANANT 120 KCSSLHMQIA LMQQQQQQHR SSHGHGHAHQ FEPEKREQQL LLDAGNHSQL VPRQFMSLGS 180 SSSPDEPRPA RGTDASPSSN PLLAVGPDAA MDCAGCHGIV GAGKAELMPL PSFEHHGHHE 240 RGGSPEAMQG WLPSKVPKFL PAAKGPEPPP PEAAAAAATM RKARVSVRAR SEAAMISDGC 300 QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED RTVLITTYEG NHNHPLPPAA 360 MAMASTTAAA ASMLLSGSMP SADGLMAGGS NFLARAVLPC SSSVATISAS APFPTVTLDL 420 TAAPGGAGRG GAAGVAAAAV RAEAVRPVQA LRRAGRGRHQ RGRRRAAGRH GERGHGRHRV 480 RPQLHRRARG RAHLLHRQQQ RQRQRRRWRH GRRREQRHGA A

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

VGLGYGANDG DGERRVVVGE MDFFETEMRK EKRDKKDHAA AGAADGDLGM KPDLTIDMGL  60
HVGGRRRNSG SEESTVDDGV SSNDEDHREA KAELAAAKSE LARVNEENKR LKTMLANANT  120
KCSSLHMQIA LMQQQQQQHR SSHGHGHAHQ FEPEKREQQL LLDAGNHSQL VPRQFMSLGS  180
SSSPDEPRPA RGTDASPSSN PLLAVGPDAA MDCAGCHGIV GAGKAELMPL PSFEHHGHHE  240
RGGSPEAMQG WLPSKVPKFL PAAKGPEPPP PEAAAAAATM RKARVSVRAR SEAAMISDGC  300
QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED RTVLITTYEG NHNHPLPPAA  360
MAMASTTAAA ASMLLSGSMP SADGLMAGGS NFLARAVLPC SSSVATISAS APFPTVTLDL  420
TAAPGGAGRG GAAGVAAAAV RAEAVRPVQA LRRAGRGRHQ RGRRRAAGRH GERGHGRHRV  480
RPQLHRRARG RAHLLHRQQQ RQRQRRRWRH GRRREQRHGA A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	497	506	RQQQRQRQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	1e-64	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG059640.1